Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDPTVPVFGTKLTPINGREETPCYNQTLSFTVLTCIISLVGLTGNAVVLW-LLGYRMRRNAVSIYILNLAAADFLFLS---FQIIRLPLRLINISHLIRKILVSVMTFPYFTGLSMLSAISTERCLSVLWPIWYRCRRPTHLSAVVCVLLWGLS-------LLFSMLEWR----FCDFLFSGADSSWCETSDFIPVAWLIFLCVVLCVS-------SLVLLVRILCGSRKMP--LTRLYVTILLTVLVFLLCGLPFGILGALIYRMHLNL-EVLYCHVYLVCMSLSSLNSSANPIIYFFVGSFRQRQNRQNLKLVLQRALQDKPEVDKGEGQLPEESLELSGSRLGP |
| 4RWA Chain:A ((122-404)) | --------------------------AIAITALYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATSTLPFQSAKYLMETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPAKAKLINICIWVLASGVGVPIMVMAVTRPRDGAVVCMLQFPSPSWYW-DTVTKICVFLFAFVVPILIITVCYGLMLL---------GSKEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTLVDIDRRDPLVVAALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLC----------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RWA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -195549 for 1792 contacts (-109.1/contact) +
2D Compatibility (PS) -25070 + (NN) -2398 + (LL) 4412
1D Compatibility (HY) -22400 + (ID) 3350
Total energy: -244355.0 ( -136.36 by residue)
QMean score : 0.127
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