Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNTSSSDFTLLGLLVNSEAAGIVFTVILAVFLGAVTANLVMIFLIQVDSRLHTPMYFLLSQLSIMDTLFICTTVPKLLADMVSKEKIISFVACGIQIFLYLTMIGSEFFLLGLMAYDCYVAVCNPLRYPVLMNRKKCLLLAAGAWFGGSLDGFLLTPITMNVPYCGSRSINHFFC-EIPAVLKL----ACADTSLYETLMYICCVLMLLIPISIIS----TSYSLILLTIHRMPSAEGRK---------KAFTTCSSHLTVVSIFYGAAFYTYVLPQSFHTPEQDKVVSAFYTI--VTPMLNPLIYSLRNKDVIGAFKKVFACCSSAQKVATSDA |
| 2Y02 Chain:A ((5-300)) | -------------LLSQQWEAGMSLLMALVVLL-IVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFL--PIMM-----------HWWRDEDPQALKCYQDPGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQ-----------SRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLA------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y02.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -256731 for 1914 contacts (-134.1/contact) +
2D Compatibility (PS) -26418 + (NN) -2540 + (LL) 2224
1D Compatibility (HY) -20800 + (ID) 3400
Total energy: -307665.0 ( -160.74 by residue)
QMean score : 0.296
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