Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIQPMASPSNSSTVPVSEFLLICFPNFQSWQHWLSLPLSLLFLLAMGANTTLLITIQLEASLHQPLYYLLSLLSLLDIVLCLTVIP----KVLAIFWYDLRSISFPACFLQMFIMNSFLPMESC--TFMVMAYDRYVAICHPLRYPSIITNQFVAKASVFIVVRNALLTAPIPILTSLLHYCGENVIENCICANLSVSRLSCDNFTLNRIYQFVAGWTLLGSDLFLIFLSYTFILRAVLR--------FKAEGAAVKALSTCGSHFILIL--FFSTILLVVVLTNVARKKVPMDILILLNVLHHLIPPALNPIVYGVRTKEIKQGIQKLLQRGR |
| 4GBR Chain:A ((2-284)) | ---------------------------EVWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILTKTW------TFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKN-KARVIILMVWIVSGLTSFLPIQMHWYRATHQEAI------NCYAEETCCDFFT-NQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLQKIDKFCLKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIRKEV----YILLNWIGY-VNSGFNPLIY-CRSPDFRIAFQELLCL-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GBR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -241724 for 1965 contacts (-123.0/contact) +
2D Compatibility (PS) -27041 + (NN) -7620 + (LL) 3252
1D Compatibility (HY) -29600 + (ID) 3550
Total energy: -306283.0 ( -155.87 by residue)
QMean score : 0.223
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