Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEPRNQTSASQFILLGLSEKPEQETLLFSLFFCMYLVMVVGNLLIILAISIDSHLHTPMYFFLANLSLVDFCLA-TNTIPKMLVSLQTGSKAISYPCCLIQMYFFHFFGIVDSVIIAMMAYDRFVAICHPLHYAKIMSLRLCRLLVGALWAFSCFISLTHILLMARLVFCGSHEVPHYFCD--LTPILRLSCTDTSVNRIFILIVAGMVIATPF-----VCILASYARILVAIMKVPSAGGRKKAFSTCSSH--LSVVALFYGTTIGVYLCPSSVLTTVKEKAS-----------AVMYTAVTPMLNPFIYSLRNRDLKGALRKLVNRKITSSS |
4WW3 Chain:A ((57-320)) | ------------------------------------------------------LQTPANMFIINLAFSDFTFSLVNGFPLMTISCFLKKWIFGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWLWSVLWAIGPIFGW------GAYTLEGVLCNCSFDYISRDSTTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEKEMAAMAKRLNAKELRKAQAGANAEMRLAKISIVIVSQFLLSWSPYAVVALLAQFGPLEWVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPWVLTCCQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WW3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -197724 for 1775 contacts (-111.4/contact) +
2D Compatibility (PS) -24239 + (NN) -1651 + (LL) 5804
1D Compatibility (HY) -19600 + (ID) 2800
Total energy: -240210.0 ( -135.33 by residue)
QMean score : 0.219
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