Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKTFSSFLQIGRNMHQGNQTTITEFILLGFFKQDEHQNLLFVLFLGMYLVTVIGNGLIIVAISLDTYLHTPMYLFLANLSFADISSISNSVPKMLVNIQTKSQSISYESCITQMYFSIVFVVIDNLLLGTMAYDHFVAICHPLNYTILMRPRFGILLTVISWFLSNIIALTHTLLLIQL---LFCNHNTLPHFFCDLAPLLKLSCSDTLINELVLFIVGLSVIIFPFTLSFFSYVCIIRAVLR---------------VSSTQGKWKA----------FSTCGSHLTVVLLFYGTIVGVYFFPSSTHPEDTDKIGAVLFTVVTPMINPFIYSLRNKDMKGALRKLINRKISSL
3VG9 Chain:A ((14-307))--------------------------------------------LAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIP-FAITISTGFCAACH-GCLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQSQGCGEGQVACLFEDVVPM----------NYMVYFNF-FACVLVPLLLMLGVYLRIFLAARRQLKQMESQPLPGERARSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCF------TFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLR-


General information:
TITO was launched using:
RESULT:

Template: 3VG9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -232453 for 1929 contacts (-120.5/contact) +
2D Compatibility (PS) -25349 + (NN) 3560 + (LL) 4580
1D Compatibility (HY) -25200 + (ID) 3400
Total energy: -278262.0 ( -144.25 by residue)
QMean score : 0.203

(partial model without unconserved sides chains):
PDB file : Tito_3VG9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3VG9-query.scw
PDB file : Tito_Scwrl_3VG9.pdb: