Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEPRKNVTDFVLLGFTQNPKEQKVLFVMFLLFYILTMVG---NLLIVVTVTVSETLGSPMSFFLAGLTFIDII-----YSSSISPRLISDLFFGNNSISFQSFMAQLFIEHLFGGSEVFL--LLVMAYDRYVAICKPL--------HYLV-IMRQWV----CVLLLVVSWVGGFLQSVFQLSIIYGLPFCGPNVIDHFFCDMYPLLKLACTDTHVIGLLVVANGGLSCTIAFLLLLISYGVILHSLKKLSQKGR-----QKAHSTCSSHITVVVFFFVPC--------IFMCARPARTFS-IDKSVSVFYTVITPMLNPLIYTLRNSEMTSAMKKL |
3DQB Chain:A ((45-317)) | --------------------------------FLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATL-------GGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGW-SRYIPEGMQCS-------CG--------IDYYTPHEETNNESFVIYMFVV-----HFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTT |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DQB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -204067 for 1714 contacts (-119.1/contact) +
2D Compatibility (PS) -23462 + (NN) -2124 + (LL) 4492
1D Compatibility (HY) -31600 + (ID) 3150
Total energy: -259911.0 ( -151.64 by residue)
QMean score : 0.236
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