Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDPQNYSLVSEFVLHGLCTSRHLQNFFFIFFFGVYVAIMLG---NLLILVTVISDPCLHSSPMYFLLGNLAFLDMWLASFATPKMIRDFLSDQKLISFGGCMAQIFFLHFTGGAEMVLLVSMAYDRYVAICKPLHYMTLMSWQTCIRLVLASWVVGFVHSISQVAFT-VNLPYCGPNEVDSFFCDLPLVIKLAC-MDTYVLGIIMISDSGLLSLSC--FLLLLI---------SYTVILLAIRQRAAGSTSKALSTCSAHIMVVTLFF--------GPCIFVYVRPFSRFS-VDKLLSVFYTIFTPLLNPIIYTLRNEEMKAAMKKLQNRRVTFQ |
| 2I35 Chain:A ((48-317)) | -------------------------------------IMLGFPINFLTLYVTVQHKKLRT-PLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKP----------------MSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNDD |
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General information:
TITO was launched using:
| RESULT:
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Template: 2I35.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -174446 for 1839 contacts (-94.9/contact) +
2D Compatibility (PS) -23975 + (NN) 3163 + (LL) 4928
1D Compatibility (HY) -18000 + (ID) 3200
Total energy: -211530.0 ( -115.02 by residue)
QMean score : 0.240
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