Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTEFIFLVLSPNQEVQRVCFVIFLFLYTAIVLGNFLIVLTVMTSRSLGSPMYFFLSYLSFMEICYSSATAPKLISDLLAERKVISWWGCMAQLFFLHFFGGTEIFLLTVMAYDHYVAICKPLSYTTIMNWQVCTVLVGIAWVGGFMHSFAQIL----------LIFHLLFCGPNVINHYFCDLVPLLKLACSDTF---LIGLLIVANGGTLSVISFGVLLASYMVILLHLRTWSSEGWCKALST------CGSHFAVVILFFGPC--------VFNSLRPSTT-LPIDKM-VAVFYTVITAILNPVIYSLRNAEMRKAMKRLWIRTLRLNEK |
| 4UG2 Chain:A ((21-309)) | ------------------------------ILGNVLVCWAVWLNSNLQNVTNYFVVSAAAADILVGVLAIPFAIA--ISTGFCAACHGCLFIACFVLVLTASSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQPKEGKAHSQGCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLM----------LGVYLRIFLAARRQL----------ARSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKI-IRSHVLR-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UG2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -254224 for 1806 contacts (-140.8/contact) +
2D Compatibility (PS) -25379 + (NN) -12566 + (LL) 4820
1D Compatibility (HY) -24000 + (ID) 3250
Total energy: -314599.0 ( -174.20 by residue)
QMean score : 0.351
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