Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MENNTEVSEFILLGLTNAPELQVPLFIMFTLIYLITLTGNLGMIILILLDSHLHTPMYFFLSNLSLAGIGYSSAVTPKVLTGLLIEDKAISYS-----ACAAQMF---FCAVFATVENYLLSSMAYDRYAAVCNPLHYTTTMT-TRVCACLAIGCYVIGFLNASIQIGDTFRLSFCMSNVIHHFFCDKP---AVITLTCSEKHISELILVLISS-----FNVFFALLVTLISYLFILITIL---KRHTGKGYQKPLS-------TCGSHLIAIFLFYITVIIMYI-------RPSSSHSMDTDKIASVFYTMIIPMLSPIVYTLRNKDVKNAFMKVVEKAKYSLDSVF |
| 2YDO Chain:A ((16-304)) | -------------------------------IAVLAILGNVLVCWAVWLNSNLQNVTNYFVV----------SAAAADILVGVLAIPFAIAISTGFCAACHGCLFIACFVLVLTASSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAI-CWVLSF-----AIGLTPMLGW--NN------CGQPKEGKAHSQGCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLKQMES----TLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLRQQEPF |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YDO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -229279 for 1831 contacts (-125.2/contact) +
2D Compatibility (PS) -24540 + (NN) -3257 + (LL) 4416
1D Compatibility (HY) -24800 + (ID) 3450
Total energy: -280910.0 ( -153.42 by residue)
QMean score : 0.318
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