Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAETSALPTGFGELEVLAVGMVLLVEALSGLSLNTLTIFSFCKTPELRTPCHLLVLSLALADSGISLNALVAAT-SSLLRRWPYGSDGCQAHGFQGFVTALASICSSAAIAWGRYHHYC---TRSQLAWNSAVSLVLFVWLSSAFWAALPLLGWGHYDYEPLGTCCTLDY--SKGDRNFTSFLFTMSFFNFAMPLFITITSYS--LMEQKLGKSGHLQVNTTLPAR------------TLLLGWGPYAILYLYAVIADVTSISPKLQMVPALIAKMVPTINAINYALGNEMVCRGIWQCLSPQKREKDRTK |
| 4PXF Chain:A ((36-311)) | ------------QFSMLAAYMFLLI--MLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PXF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -160429 for 1959 contacts (-81.9/contact) +
2D Compatibility (PS) -26041 + (NN) -8287 + (LL) 1336
1D Compatibility (HY) -24400 + (ID) 3600
Total energy: -221421.0 ( -113.03 by residue)
QMean score : 0.288
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