Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNATGTPVAPESCQQLAAGGHSRLIVLHYNHSGRLAGRGGPEDGGLGALRGLSVAASCLVVLENLLVLAAITSHMRSRRWVYYCLVNITLSDLLTGAAYLANVLLSGARTFRLAPAQWFLR--EGLLFTAL------AASTFSLLFTAGERFATMVRPVAESGATKTSRVYGFIGLCWLLAALLGMLPLLGWN-----------CLCAFDRCSSLLPLYSKRYILFCLVIFAGVLATI---MGLYGAIF-----RLVQASGQKAPRPAAR---RKARRLLKTVLMILLAFLVCWGPL-----FGLLLADVFGSNLWAQEYLRGMDWILALAVLNSAVNPIIYSFRSREVCRAVLSFLCCGCLRLGMRGPGDCLARAVEAHSGASTTDSSLRPRDSFRGSRSLSFRMREPLSSISSVRSI |
3UZC Chain:A ((12-294)) | ---------------------------------------------------VELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADILVGVL---------AIPFAITISTGFCAACHGCLFIACFVLVLAQSSIFSLLAIAIDRYIAIAIPLRYNGLVTGTRAAGIIAICWVLSFAIGLTPMLGWNNCGQPGCGEGQVACLFE---DVVPMNYMVYFNF----FACVLVPLLLMLGVYLRIFAAARRQLKQMESQPLPGERARSTLQKEVHAAKSAAIIAGLFALCWLPLHIINCFTFFCPDCSHAPLWL------MYLAIVLAHTNSVVNPFIYAYRIREFRQTFRKIIRS------------------------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3UZC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -185224 for 1717 contacts (-107.9/contact) +
2D Compatibility (PS) -24871 + (NN) -12712 + (LL) 6352
1D Compatibility (HY) -24000 + (ID) 4200
Total energy: -244655.0 ( -142.49 by residue)
QMean score : 0.205
|
|
|