Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKPITPSTYVRCLNVGLIRKLSDFIDPQEGWKKLAVAIKKPSGDDRYNQFHIRRFEALLQTGKSPTSELLFDWGTTNCTVGDLVDLLIQNEFFAPASLLLPDAVPKTANTLPSKEAITVQQKQMPFCDKDRTLMTPVQNLEQSYMPPDSSSPENKSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL-SCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVD-EHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDAD-STSVEAM--YSVASQCLHEKKNKRPDIKKVQQLLQEMTAS |
| 4OA2 Chain:A ((10-299)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------LAFADLLQATNGFHNDSL------IGSGGFGDVYKAILKDGSAVAIKKLIHV----SGQGDREFMAEMETIGKIKHRNLVPLLGYCKVGDERLLVYEFMKYGSLEDVLHDPKKAGVKLNWSTRRKIAIGSARGLAFLHHNCSPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDS-----------KQH---AKLRISDVFDPELMKEDPALEIELLQHLKVAVACLDDRAWRRPTMVQVMAMFKEIQA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OA2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -81067 for 2134 contacts (-38.0/contact) +
2D Compatibility (PS) -28441 + (NN) -6055 + (LL) 10696
1D Compatibility (HY) -24800 + (ID) 5200
Total energy: -134867.0 ( -63.20 by residue)
QMean score : 0.412
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