Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
------AVTCGDVTSAIAPCMSYAT---GQASSPS---AGCCSGVRTLNGKASTSADRQAACRCLKNLAGSF-------KGIS----MGNVANIPGECGVSVSFPINNNVNCDTLH---------
1HSS Chain:A ((5-124))
MCYPGQAFQ----VPALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI--------SEWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLPIVV--DASGDGAYVCKDVAAYPDA
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55397 for 512 contacts (-108.2/contact) +
2D Compatibility (PS) -8184 + (NN) -3294 + (LL) 160
1D Compatibility (HY) -5200 + (ID) 600
Total energy: -72515.0 ( -141.63 by residue)
QMean score : 0.387
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: