Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
------AISCSAVYNTLMPCLPYVQA---GGTVPR----ACCGGIQSLLAAANNTPDRRTICGCLKNVANGASGGPY----------ITRAAALPSKCNVSLPYKISTSVNCNAIN---------
1HSS Chain:A ((5-124))
MCYPGQAFQ----VPALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI--------SEWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLPIV--VDASGDGAYVCKDVAAYPDA
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57465 for 512 contacts (-112.2/contact) +
2D Compatibility (PS) -8110 + (NN) -808 + (LL) 880
1D Compatibility (HY) -4800 + (ID) 800
Total energy: -71103.0 ( -138.87 by residue)
QMean score : 0.228
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: