Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------LMSCGTVNG--NLAGCIAYLTRGAPLTQGC---CNGVTNLKNMAS-----------TTPDRQQACRCLQSAAKAV----GPGLNTARAAGLPSACKVNIPYKISASTNCNTVR-------- |
1QPO Chain:A ((1-284)) | GLSDWELAAARAAIARGLDEDLRYGPDVTTLATVPASATTTASLVTREAGVVAGLDVALLTLNEVLGTNGYRVLDRVEDGARVPPGEALMTLEAQTRGLLTAERTMLNLVGHLSGIATATAAWVDAVRGTKAKIRDTRKTLPGLRALQKYAVRTGGGVNHRLGLGDAALIKDNHVAAAGSVVDALRAVRNA-APDLPCEVEVDSLEQLDAVLPEKPELILLDNFAVWQTQTAVQRRDSRAPTVMLESSGGLSLQTAATY-AETGVDY---LAVGALTHSVRVLDIGLDM |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QPO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -26072 for 470 contacts (-55.5/contact) +
2D Compatibility (PS) -9168 + (NN) -1768 + (LL) 20
1D Compatibility (HY) -4400 + (ID) 800
Total energy: -42188.0 ( -89.76 by residue)
QMean score : 0.321
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