Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
------AISCGTVAGSLAPCATYLSK---GGLVP----PSCCAGVKTLNSMAKTTPDRQQACRCIQSTAKSI-------SGLN----PSLASGLPGKCGVSIPYPISMSTNCNNIK---------
1HSS Chain:A ((5-124))
MCYPGQAFQ----VPALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI--------SEWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLPIV--VDASGDGAYVCKDVAAYPDA
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43162 for 513 contacts (-84.1/contact) +
2D Compatibility (PS) -8150 + (NN) -2218 + (LL) 352
1D Compatibility (HY) -6000 + (ID) 800
Total energy: -59978.0 ( -116.92 by residue)
QMean score : 0.359
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: