Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QCDPEQLSACVSPIFYGTAPSESCCSNLRA-----------QQKEGCLCQYAKDPTYASYVNNTNARKTIAACGIPIPSC
1BWO Chain:A ((7-78))
---DSLVRPCLSYVQGGPGPSGQCCDGVKNLHNQARSQSDRQS--ACNCLKGIARGIH-NLNEDNARSIPPKCGVNLP--
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12017 for 369 contacts (-32.6/contact) +
2D Compatibility (PS) -6175 + (NN) -1316 + (LL) 268
1D Compatibility (HY) -3200 + (ID) 850
Total energy: -23290.0 ( -63.12 by residue)
QMean score : 0.355
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: