Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QQPSCAAQLTQLAPCARVGVAPAPGQPLPAPPAECCSALGAVSHDCACGTLD---I--------INSLPAKCGLPRVTCQ
1L6H Chain:A ((6-68))
---------GQLTVCTGAIAGG------ARPTAACCSSLRAQ-QGCFCQFAKDPRYGRYVNSPNARKAVSSCGIALPTC-
General information:
TITO was launched using:
RESULT:
Template:
1L6H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33161 for 353 contacts (-93.9/contact) +
2D Compatibility (PS) -5388 + (NN) -4602 + (LL) 792
1D Compatibility (HY) -1600 + (ID) 800
Total energy: -44759.0 ( -126.80 by residue)
QMean score : 0.232
(partial model without unconserved sides chains):
PDB file :
Tito_1L6H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1L6H-query.scw
PDB file :
Tito_Scwrl_1L6H.pdb
: