Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AEGAGECGRASPDRMALRMAPCISAADEPDSAPSSSCCSAVHTIGK--------SPSCLCAVMLSGTAKMA-GIRPEVAITIPKRCNIADRPVGYKCGDYTLP
1SIY Chain:A ((3-78))
-----------CGQVQGNLAQCIGFLQKG-GVVPPSCCTGVKNILNSSRTTADRRAVCSC--LK-AAAGAVRGINPNNAEALPGKCGVNIP------------
General information:
TITO was launched using:
RESULT:
Template:
1SIY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43280 for 474 contacts (-91.3/contact) +
2D Compatibility (PS) -6802 + (NN) -3735 + (LL) 508
1D Compatibility (HY) -3600 + (ID) 850
Total energy: -57759.0 ( -121.85 by residue)
QMean score : 0.121
(partial model without unconserved sides chains):
PDB file :
Tito_1SIY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SIY-query.scw
PDB file :
Tito_Scwrl_1SIY.pdb
: