Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AEGAGECGRASADRVALRLAPCVSAADDPQSAPSSSCCSAVHTIGQ--------SPSCLCAVMLSNTARVA-GIKPEVAITIPKRCNMADR-PV--GYKCGDYTLP
1SIY Chain:A ((2-88))
----------TCGQVQGNLAQCIGFLQKG-GVVPPSCCTGVKNILNSSRTTADRRAVCSCL--KA-AAGAVRGINPNNAEALPGKCGVNIPYKISTSTNCN-----
General information:
TITO was launched using:
RESULT:
Template:
1SIY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51224 for 543 contacts (-94.3/contact) +
2D Compatibility (PS) -7793 + (NN) -3830 + (LL) 824
1D Compatibility (HY) -3600 + (ID) 950
Total energy: -66573.0 ( -122.60 by residue)
QMean score : 0.173
(partial model without unconserved sides chains):
PDB file :
Tito_1SIY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SIY-query.scw
PDB file :
Tito_Scwrl_1SIY.pdb
: