Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AAGTECQNDVEVLKTTCYKFVEKDGPKLQPSPDCCTSMKGVNV----------PCVCTYLGSPGVRDNINMDKVFYVTKQCGIAIPGNCGGSKV
1BWO Chain:A ((2-78))
----DCGHVDSLV-RPCLSYVQGG-P--GPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGI-HNLNEDNARSIPPKCGVNLP--------
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22069 for 433 contacts (-51.0/contact) +
2D Compatibility (PS) -6320 + (NN) 1104 + (LL) 88
1D Compatibility (HY) -4000 + (ID) 900
Total energy: -32097.0 ( -74.13 by residue)
QMean score : 0.136
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: