Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QVCGANLSGLMNECQRYVSNAGPNSQPPSRSCCALIRPIDVPCACRYVS-RDVTNYIDMDKVVYVARSCGKKIPSGYKCGSYTIPAA
1L6H Chain:A ((8-69))
----------LTVCTGAIAGG----ARPTAACCSSLRAQ-QGCFCQFAKDPRYGRYVNSPNARKAVSSCGIALP---TCH-------
General information:
TITO was launched using:
RESULT:
Template:
1L6H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20826 for 422 contacts (-49.4/contact) +
2D Compatibility (PS) -6230 + (NN) -1552 + (LL) 276
1D Compatibility (HY) -2000 + (ID) 650
Total energy: -30982.0 ( -73.42 by residue)
QMean score : 0.130
(partial model without unconserved sides chains):
PDB file :
Tito_1L6H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1L6H-query.scw
PDB file :
Tito_Scwrl_1L6H.pdb
: