Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QTECVSKIVPCFRFLNTTTKPSTDCCNSIKEAMEKD-------FSCLCTIYNTPGLLAQF-NITTDQALGLNLRCGVNTDLSACSGTLILQDLRPLQL
1T12 Chain:A ((9-78))
-----SNLAPCLAYLRNTG-PLGRCCGGVKALVNSARTTEDRQIACTC--LKSA--AGAISGINLGKAAGLPSTCGVNIP------------------
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27843 for 408 contacts (-68.2/contact) +
2D Compatibility (PS) -6499 + (NN) -1431 + (LL) 2256
1D Compatibility (HY) -5200 + (ID) 950
Total energy: -39667.0 ( -97.22 by residue)
QMean score : 0.229
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: