Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
HPCGRTFLSALIQLVPCRPSVAPFSTLPPNGLCCAAIKTLGQPCLCVLAKGPP-IVGVDRTLALHLPGKCSANFLPCN
1N89 Chain:A ((4-67))
----------ASQLAVCASAILSG--AKPSGECCGNLRAQQ-GCFCQYAKDPTYGQYIRSPHARDTLTSCGLAVPHC-
General information:
TITO was launched using:
RESULT:
Template:
1N89.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38028 for 394 contacts (-96.5/contact) +
2D Compatibility (PS) -6525 + (NN) -5813 + (LL) 428
1D Compatibility (HY) 0 + (ID) 750
Total energy: -50688.0 ( -128.65 by residue)
QMean score : 0.179
(partial model without unconserved sides chains):
PDB file :
Tito_1N89.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1N89-query.scw
PDB file :
Tito_Scwrl_1N89.pdb
: