Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--------------------------QATA---TAPSCTDVISNTAPCLPYISRTSPAPSDVCCAGIKNVAAMAS----THANQVDICTCLKSNIAGFSYDPTLIAALPKKCS------VSINLLPISASTDCSKVSLGN
1DLW Chain:A ((1-116))
SLFEQLGGQAAVQAVTAQFYANIQADATVATFFNGIDMPNQTNKTAAFLCAALGGPNAWTG------RNLKEVHANMGVSNAQFTTVIGHLRSALTGAGVAAALVEQTVAVAETVRGDVVTV------------------
General information:
TITO was launched using:
RESULT:
Template:
1DLW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7824 for 384 contacts (-20.4/contact) +
2D Compatibility (PS) -7510 + (NN) 2138 + (LL) 1060
1D Compatibility (HY) -2000 + (ID) 600
Total energy: -14736.0 ( -38.38 by residue)
QMean score : 0.210
(partial model without unconserved sides chains):
PDB file :
Tito_1DLW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1DLW-query.scw
PDB file :
Tito_Scwrl_1DLW.pdb
: