Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ------------------------------------------------------------ALSCGQVDSKLAPCVAYVTGRASAISKEC---CSGVQGLNGLAR-----------SSPDRQTACRCLKSLATSI-----KAINMGKVSGVPGKCGVSVPFPISMSTDCNKVH-------- |
1QPO Chain:A ((116-284)) | IATATAAWVDAVRGTKAKIRDTRKTLPGLRALQKYAVRTGGGVNHRLGLGDAALIKDNHVAA-AGSVVDALRAVRNA------APDLPCEVEVDSLEQLDAVLPEKPELILLDNFAVWQTQTAVQRRDSRAPTVMLESSGGLSLQTAATY-AETGVDY---LAVGALTHSVRVLDIGLDM |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1QPO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -24275 for 414 contacts (-58.6/contact) +
2D Compatibility (PS) -8407 + (NN) 730 + (LL) -28
1D Compatibility (HY) -2800 + (ID) 750
Total energy: -35530.0 ( -85.82 by residue)
QMean score : 0.222
|
|
|