Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------------------SVAPAPAPGSE--ETCGTVVG--ALMPCLPFVQGKEKEPSKGC---CSGAKRLDGETK-----------TGPQRVHACECIQTAMKTY-----SDIDGKLVSEVPKHCGI---VDSKLPPIDVNMDCKTLG--- |
| 1QPO Chain:A ((116-284)) | IATATAAWVDAVRGTKAKIRDTRKTLPGLRALQKYAVRTGGGVNHRLGLGDAALIKDNHVAAAGSVVDALRAVR--NAAPDLPCEVEVDSLEQLDAVLPEKPELILLDNFAVWQTQTAVQRRDSRAPTVMLESSGGLSLQTAATY-AETGVDYLAVGALTHSVRVLD---IGLDM |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QPO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5679 for 492 contacts (-11.5/contact) +
2D Compatibility (PS) -10091 + (NN) -2249 + (LL) -76
1D Compatibility (HY) -1200 + (ID) 800
Total energy: -20095.0 ( -40.84 by residue)
QMean score : 0.268
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