Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AAACDPK--PLVVCDPAFMDGAKPAAACCSTLRA-----------QEACLCVYAKDPKFAKY--INNPNTAKTFTSCGIAIPKC
2ALG Chain:A ((1-79))
MITCGQVSSSLAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNC--LKQLS-ASVPGVNPNNAAALPGKCGVSIP--
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12991 for 386 contacts (-33.7/contact) +
2D Compatibility (PS) -6385 + (NN) -1429 + (LL) 536
1D Compatibility (HY) -3600 + (ID) 1100
Total energy: -24969.0 ( -64.69 by residue)
QMean score : 0.175
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: