Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ATICNIDTSKLAECLPAVSGRSPPPPTKACCTALLSADL----------HCLCNYKSALPAF-GINPALAMALPKKCGGSLP----PNCKVDAEP
1AFH Chain:A ((2-92))
-ISCGQVASAIAPCISYARGQGS-GPSAGCCSGVRSLNNAARTTADRRAACNC-LKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRV-
General information:
TITO was launched using:
RESULT:
Template:
1AFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37746 for 557 contacts (-67.8/contact) +
2D Compatibility (PS) -8158 + (NN) -7743 + (LL) -216
1D Compatibility (HY) -2400 + (ID) 1100
Total energy: -57363.0 ( -102.99 by residue)
QMean score : 0.372
(partial model without unconserved sides chains):
PDB file :
Tito_1AFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AFH-query.scw
PDB file :
Tito_Scwrl_1AFH.pdb
: