Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
GGVVEICNVSKDDLMPCKPAVTQPPAQPVQACCSVLSTANLTCFCEFGNNYPSLLRMFGIDPDLAKALPGECKLNSPPGC
1L6H Chain:A ((2-68))
-----GCNAG--QLTVCTGAIAGG-ARPTAACCSSLRAQ-QGCFCQFAKDP--RYGR-YVNSPNARKAVSSCGIALP-TC
General information:
TITO was launched using:
RESULT:
Template:
1L6H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37833 for 502 contacts (-75.4/contact) +
2D Compatibility (PS) -6907 + (NN) -6761 + (LL) -264
1D Compatibility (HY) -2000 + (ID) 1000
Total energy: -54765.0 ( -109.09 by residue)
QMean score : 0.205
(partial model without unconserved sides chains):
PDB file :
Tito_1L6H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1L6H-query.scw
PDB file :
Tito_Scwrl_1L6H.pdb
: