Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
SVDCTTLVLSMADCLSFVSNDSTSKKPEGTCCSGLKTVLGTD-------AECLCEAFKSS-AQFGVVLNVTKALALPSACKIKAP----PASNCG
1AFH Chain:A ((2-90))
-ISCGQVASAIAPCISYARGQGS--GPSAGCCSGVRSLNNAARTTADRRAACNC--LKNAAAGVS-GLNAGNAASIPSKCGVSIPYTISTSTDCS
General information:
TITO was launched using:
RESULT:
Template:
1AFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32575 for 569 contacts (-57.2/contact) +
2D Compatibility (PS) -7838 + (NN) -2422 + (LL) 448
1D Compatibility (HY) -4800 + (ID) 1100
Total energy: -48287.0 ( -84.86 by residue)
QMean score : 0.379
(partial model without unconserved sides chains):
PDB file :
Tito_1AFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AFH-query.scw
PDB file :
Tito_Scwrl_1AFH.pdb
: