Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QSTICKMPVAGLMSCKPSVTPPNPTAPSADCCSALSHAD----------INCLCSYKNSNLLPSL-GIDPKLAMQLPGKCKLPHPANC
1BWO Chain:A ((2-79))
---DCGHVDSLVRPCLSYVQGG--PGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIAR---GIHNLNEDNARSIPPKCGVNLPY--
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21645 for 433 contacts (-50.0/contact) +
2D Compatibility (PS) -6916 + (NN) -6898 + (LL) 112
1D Compatibility (HY) -2000 + (ID) 700
Total energy: -38047.0 ( -87.87 by residue)
QMean score : 0.255
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: