Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
INCDNDLIGLASKCQKYVVKQGSSAKPSPECCKVVKNVNV----------PCVCSHVTKQIEDL--ISMKKVFDVAKSCGKKVT----PGTKCGSYTVPN
1T12 Chain:A ((2-90))
ITCGQVTSNL-APCLAYLRNTG----PLGRCCGGVKALVNSARTTEDRQIACTC--LKSAAGAISGINLGKAAGLPSTCGVNIPYKISPSTDCSKV----
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25267 for 490 contacts (-51.6/contact) +
2D Compatibility (PS) -7335 + (NN) -2298 + (LL) 336
1D Compatibility (HY) -4800 + (ID) 1000
Total energy: -40364.0 ( -82.38 by residue)
QMean score : 0.422
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: