Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QSICNVPISGLMACKPAVTPPNPSAPTSACCSALTHAD----------MRCLCSYKNSNLLPSLGIDPNLALQLPPKCNLPRPNC
1BWO Chain:A ((2-78))
--DCGHVDSLVRPCLSYVQGG--PGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGI--HNLNEDNARSIPPKCGVNLP--
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30045 for 435 contacts (-69.1/contact) +
2D Compatibility (PS) -6665 + (NN) -6245 + (LL) -320
1D Compatibility (HY) -1200 + (ID) 750
Total energy: -45225.0 ( -103.97 by residue)
QMean score : 0.296
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: