Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QNCSAAI--GGLMSCGPYVL----PGNQ---L--TP-----------STQCCSAIQAVNHGCLCETIN----------------------IISSLPGHCSLPPVSCGTA
1PSY Chain:A ((16-119))
QQCRQEVQRKDLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQVRDECQCEAIKYIAEDQIQQGQLHGEESERVAQRAGEIVSSCGV---RCM--
General information:
TITO was launched using:
RESULT:
Template:
1PSY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44552 for 413 contacts (-107.9/contact) +
2D Compatibility (PS) -5861 + (NN) 2786 + (LL) 108
1D Compatibility (HY) -5200 + (ID) 850
Total energy: -53569.0 ( -129.71 by residue)
QMean score : 0.331
(partial model without unconserved sides chains):
PDB file :
Tito_1PSY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PSY-query.scw
PDB file :
Tito_Scwrl_1PSY.pdb
: