Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QSSSSCTNVLVSMSPCLDYIQGNSSKPSSSCCSQLANVVR-------SQPQCLCEVLNGGASSLGVSVNQTQAMALPTACNVKTP----PASQCNATIL
2ALG Chain:A ((3-90))
----TCGQVSSSLAPCIPYVRGG-GAVPPACCNGIRNVNNLARTTPDRQAACNC--LKQLSASVP-GVNPNNAAALPGKCGVSIPYKISASTNCAT---
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40590 for 487 contacts (-83.3/contact) +
2D Compatibility (PS) -7915 + (NN) -2779 + (LL) 928
1D Compatibility (HY) -6000 + (ID) 1300
Total energy: -57656.0 ( -118.39 by residue)
QMean score : 0.363
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: