Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QINTPCSPSMLSTFTPCINFLRNSTANGTSPTADCCKSLQTLTS-------GGRDCLCLIVTGSV-PFQIPINRTLAISLPRACNMPGVPVQCKV
2ALG Chain:A ((4-79))
------CGQVSSSLAPCIPYVRGG----GAVPPACCNGIRNVNNLARTTPDRQAACNC--LKQLSASVP-GVNPNNAAALPGKCGVSIP------
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40545 for 432 contacts (-93.9/contact) +
2D Compatibility (PS) -6864 + (NN) -2807 + (LL) 1224
1D Compatibility (HY) -4800 + (ID) 700
Total energy: -54492.0 ( -126.14 by residue)
QMean score : 0.378
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: