Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----------------------------------AVPCNTVDAKAAACVGFATGKATKPSAECCTGLQQLAQTVKSVDDKKAICRCLKAAAKSLGIQDKFLSKIPQACN------INVGFPVSINTNCETIH
1DLY Chain:A ((44-164))
SLFAKLGGREAVEAAVDKFYNKIVADPTVSTYFSNTDMKVQRSKQFAFLAYALGGASEWKGKDMRTAHKDLVPHLSDVHFQAVARHLSDTLTELGVPPEDITDAMAVVASTRTEVLNMPQQ-----------
General information:
TITO was launched using:
RESULT:
Template:
1DLY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7667 for 411 contacts (-18.7/contact) +
2D Compatibility (PS) -8387 + (NN) -2634 + (LL) 720
1D Compatibility (HY) -400 + (ID) 600
Total energy: -18968.0 ( -46.15 by residue)
QMean score : 0.281
(partial model without unconserved sides chains):
PDB file :
Tito_1DLY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1DLY-query.scw
PDB file :
Tito_Scwrl_1DLY.pdb
: