Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DWAEDKKECSNQLVALSTCIPFVGGNTKVPDSTCCTNLRKKIN-------QTKKCLCLLVADRNDPDLGFKVNATLALILPSICHAPSNASECPAEANKSSQ
2ALG Chain:A ((3-79))
-------TCGQVSSSLAPCIPYVRGG-GAVPPACCNGIRNVNNLARTTPDRQAACNC--LKQLS-ASVP-GVNPNNAAALPGKCGVSIP-------------
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24962 for 446 contacts (-56.0/contact) +
2D Compatibility (PS) -7326 + (NN) -5276 + (LL) 1416
1D Compatibility (HY) -2800 + (ID) 950
Total energy: -39898.0 ( -89.46 by residue)
QMean score : 0.202
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: