Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DCKTSIPSLISQCSKYVQVSGPEIPPSQGCCDVMKDLDIPCLCNLVT-PEVEKLVSMEKVVFVARTCGLTLEPGMKCGSFTVPPA
1L6H Chain:A ((8-69))
---------LTVCTGAIAGGA---RPTAACCSSLRAQ-QGCFCQFAKDPRYGRYVNSPNARKAVSSCGIALP---TCH-------
General information:
TITO was launched using:
RESULT:
Template:
1L6H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34118 for 422 contacts (-80.8/contact) +
2D Compatibility (PS) -5934 + (NN) 1259 + (LL) 480
1D Compatibility (HY) -2400 + (ID) 600
Total energy: -41313.0 ( -97.90 by residue)
QMean score : 0.198
(partial model without unconserved sides chains):
PDB file :
Tito_1L6H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1L6H-query.scw
PDB file :
Tito_Scwrl_1L6H.pdb
: