Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ACSTDLSPYKPCLPAVMGTTPPSPTKECCIAVKSADI----------LCLCEAVGTTELPGLNKEAALTLPQRCGAVAF----STRVCGSK
1BWO Chain:A ((2-88))
DCGHVDSLVRPCLSYVQGG--PGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLNEDNARSIPPKCGVNLPYTISLNIDCS--
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22749 for 466 contacts (-48.8/contact) +
2D Compatibility (PS) -7600 + (NN) -3982 + (LL) -52
1D Compatibility (HY) -1600 + (ID) 1100
Total energy: -37083.0 ( -79.58 by residue)
QMean score : 0.218
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: