Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ACGS-SYDLAACLPAAESDIQPSAQCCTQLSSYLATDTP-----EECLCQTAYSPFFQS-GADIQFAIKIPQKCNLSYR----AGIQCNGNTIPGGQ
1SIY Chain:A ((3-89))
-CGQVQGNLAQCIGFLQKGGVVPPSCCTGVKNILNSSRTTADRRAVCSCLK--AAAGAVRGINPNNAEALPGKCGVNIPYKISTSTNCNS-------
General information:
TITO was launched using:
RESULT:
Template:
1SIY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21631 for 520 contacts (-41.6/contact) +
2D Compatibility (PS) -7749 + (NN) -3242 + (LL) 192
1D Compatibility (HY) -2800 + (ID) 900
Total energy: -36130.0 ( -69.48 by residue)
QMean score : 0.310
(partial model without unconserved sides chains):
PDB file :
Tito_1SIY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SIY-query.scw
PDB file :
Tito_Scwrl_1SIY.pdb
: