Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGCDIDLLLPCLNASRDPRVKPDKRCCDAIRQFLPPRKQKSAIDCLCRLATSKEAVALKINLSAAIAIPQKCGIKFE----QRFYCQGRLVPGS
1T12 Chain:A ((5-90))
-GQVTSNLAPCLAYLRNTG--PLGRCCGGVKALVNSARTTEDRQIACTCLKSAAGAISGINLGKAAGLPSTCGVNIPYKISPSTDCSKV-----
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29396 for 570 contacts (-51.6/contact) +
2D Compatibility (PS) -8422 + (NN) -1364 + (LL) 428
1D Compatibility (HY) -2800 + (ID) 1000
Total energy: -42554.0 ( -74.66 by residue)
QMean score : 0.395
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: