Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ICDISSGGIRSCQPAAAVRNPTDAPSAECCAALAG--------ADLA--CLCRYKSVGGMWVRFY-KIDVKRAMALPGKCGLTMPANC
1SIY Chain:A ((3-78))
-CGQVQGNLAQCIGFLQKGG---VVPPSCCTGVKNILNSSRTTADRRAVCSCL-KAAA----GAVRGINPNNAEALPGKCGVNIP---
General information:
TITO was launched using:
RESULT:
Template:
1SIY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23570 for 424 contacts (-55.6/contact) +
2D Compatibility (PS) -6760 + (NN) -4716 + (LL) 636
1D Compatibility (HY) -2400 + (ID) 1000
Total energy: -37810.0 ( -89.17 by residue)
QMean score : 0.163
(partial model without unconserved sides chains):
PDB file :
Tito_1SIY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SIY-query.scw
PDB file :
Tito_Scwrl_1SIY.pdb
: