Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGRVPVDRTALKLAPCAAATQNPRAAVPPSCCAQVRGIGR--------NPKCLCAVMLSNTARQA-GVKPAVAMTIPKRCAIANRPIGYKCGPYTLP
1BWO Chain:A ((2-78))
-------DCGHVDSLVRPCLSYVQGG-PGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIA---RGIHNLNEDNARSIPPKCGVNLP------------
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28930 for 440 contacts (-65.8/contact) +
2D Compatibility (PS) -6811 + (NN) -2163 + (LL) 440
1D Compatibility (HY) -2800 + (ID) 650
Total energy: -40914.0 ( -92.99 by residue)
QMean score : 0.117
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: