Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
SSDVCTVVSPVLESCYIALQSGESFMKSESVCCKSLEILENRIRDSDHQFTRYAVCECFKASDNDKQVLVNENLLEVQVLCGPHVPYPIT-----------------SYSDCLQYADEEIARTAL
2W5Q Chain:A ((191-237))
---------------------------------------------------------------------------SHLITLTNHYPFTLDEKDATIEKSNTGDATVDGYIQTARYLDEALEE---
General information:
TITO was launched using:
RESULT:
Template:
2W5Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6240 for 136 contacts (-45.9/contact) +
2D Compatibility (PS) -3309 + (NN) -2155 + (LL) 5780
1D Compatibility (HY) -1600 + (ID) 300
Total energy: -7824.0 ( -57.53 by residue)
QMean score : 0.091
(partial model without unconserved sides chains):
PDB file :
Tito_2W5Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2W5Q-query.scw
PDB file :
Tito_Scwrl_2W5Q.pdb
: