Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QSGCTNVLISMAPCLSYVTGSSSTPSSSCCSQLASVVLSQP-------QCLCAALNGGGASLGLNINETLALALPGACKVQTP----PVSKCNGKFKNNFLPEI
1T12 Chain:A ((2-89))
-ITCGQVTSNLAPCLAYLRNTG--PLGRCCGGVKALVNSARTTEDRQIACTC--LKSAAGAIS-GINLGKAAGLPSTCGVNIPYKISPSTDCSK----------
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48186 for 531 contacts (-90.7/contact) +
2D Compatibility (PS) -8136 + (NN) -4886 + (LL) 1184
1D Compatibility (HY) -5600 + (ID) 1250
Total energy: -66874.0 ( -125.94 by residue)
QMean score : 0.352
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: