Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QQLPQGCGPKLGVLLPCLPFLQGQGSNPTQPCCNGLETVVKLNP-------ACLCALVNSQ-LGN-RINITLALSLPSLCNLAGV----TIDLCNPTGKFSFKI
1T12 Chain:A ((3-89))
-----TCGQVTSNLAPCLAYLRNTG--PLGRCCGGVKALVNSARTTEDRQIACTC--LKSAAGAISGINLGKAAGLPSTCGVNIPYKISPSTDCSK--------
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45053 for 498 contacts (-90.5/contact) +
2D Compatibility (PS) -7724 + (NN) -4098 + (LL) 1056
1D Compatibility (HY) -3200 + (ID) 1250
Total energy: -60269.0 ( -121.02 by residue)
QMean score : 0.289
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: