Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AVSAAKCKEERRLGINACKAVVYGKSPTPACCHRMRVTHL----------GCVCSVITPKLAAL--VDVNRMIELVKGCGRKLP----RHYKCGSITFP
1T12 Chain:A ((3-90))
-----TCGQVTSNL-APCLAYLRNTGPLGRCCGGVKALVNSARTTEDRQIACTC--LKSAAGAISGINLGKAAGLPSTCGVNIPYKISPSTDCSKV---
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32063 for 483 contacts (-66.4/contact) +
2D Compatibility (PS) -7563 + (NN) -4209 + (LL) 1008
1D Compatibility (HY) -3200 + (ID) 700
Total energy: -46727.0 ( -96.74 by residue)
QMean score : 0.358
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: