Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DMSPTECKEERKVAGNACRPVLYW-RSPSADCCQRVRVSHVECVCPYVS-TKTAAIIGGLGVPYVVKKIEGCGRTVPRKFKCGSITTP
1L6H Chain:A ((8-69))
--------------LTVCTGAIAGGARPTAACCSSLRAQ-QGCFCQFAKDPRYGR---YVNSPNARKAVSSCGIALP---TCH-----
General information:
TITO was launched using:
RESULT:
Template:
1L6H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28015 for 410 contacts (-68.3/contact) +
2D Compatibility (PS) -6225 + (NN) -2022 + (LL) 1664
1D Compatibility (HY) -1600 + (ID) 700
Total energy: -36898.0 ( -90.00 by residue)
QMean score : 0.019
(partial model without unconserved sides chains):
PDB file :
Tito_1L6H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1L6H-query.scw
PDB file :
Tito_Scwrl_1L6H.pdb
: